scyTo_0011219 protein (Scyliorhinus torazame)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

scyTo_0011219

Uncharacterized protein. (303 aa)

Predicted Functional Partners:

scyTo_0002274

0.497

scyTo_0026783

0.487

scyTo_0012615

0.476

scyTo_0016677

0.463

scyTo_0015700

0.463

Your Current Organism:

Scyliorhinus torazame

NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
scyTo_0002274	scyTo_0011219	A0A401PIL3	A0A401NJB4	Homeobox domain-containing protein.	Uncharacterized protein.	0.497
scyTo_0002274	scyTo_0026783	A0A401PIL3	A0A401QL45	Homeobox domain-containing protein.	Uncharacterized protein.	0.497
scyTo_0011219	scyTo_0002274	A0A401NJB4	A0A401PIL3	Uncharacterized protein.	Homeobox domain-containing protein.	0.497
scyTo_0011219	scyTo_0012615	A0A401NJB4	A0A401NG04	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.476
scyTo_0011219	scyTo_0015700	A0A401NJB4	A0A401PX33	Uncharacterized protein.	Uncharacterized protein.	0.463
scyTo_0011219	scyTo_0016677	A0A401NJB4	A0A401PW79	Uncharacterized protein.	Uncharacterized protein.	0.463
scyTo_0011219	scyTo_0026783	A0A401NJB4	A0A401QL45	Uncharacterized protein.	Uncharacterized protein.	0.487
scyTo_0012615	scyTo_0011219	A0A401NG04	A0A401NJB4	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.476
scyTo_0015700	scyTo_0011219	A0A401PX33	A0A401NJB4	Uncharacterized protein.	Uncharacterized protein.	0.463
scyTo_0015700	scyTo_0016677	A0A401PX33	A0A401PW79	Uncharacterized protein.	Uncharacterized protein.	0.510
scyTo_0016677	scyTo_0011219	A0A401PW79	A0A401NJB4	Uncharacterized protein.	Uncharacterized protein.	0.463
scyTo_0016677	scyTo_0015700	A0A401PW79	A0A401PX33	Uncharacterized protein.	Uncharacterized protein.	0.510
scyTo_0026783	scyTo_0002274	A0A401QL45	A0A401PIL3	Uncharacterized protein.	Homeobox domain-containing protein.	0.497
scyTo_0026783	scyTo_0011219	A0A401QL45	A0A401NJB4	Uncharacterized protein.	Uncharacterized protein.	0.487