STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009271Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
scyTo_0002904
Uncharacterized protein.
   
 
 0.964
scyTo_0021764
Uncharacterized protein.
   
 0.953
scyTo_0009194
Ubiquitin-like domain-containing protein.
   
 0.916
scyTo_0014717
Ubiquitin-like domain-containing protein.
   
 0.916
scyTo_0008768
USP domain-containing protein.
 
     0.903
scyTo_0003048
Ubiquitin-like domain-containing protein.
    
 0.897
scyTo_0017775
Ubiquitin-like domain-containing protein.
    
 0.897
scyTo_0007086
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.882
scyTo_0007017
Ubiquitin-like domain-containing protein.
   
 0.865
scyTo_0015053
AN1-type domain-containing protein.
   
 0.827
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.