STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011356SAM domain-containing protein. (412 aa)    
Predicted Functional Partners:
scyTo_0016277
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.851
scyTo_0014138
Neutral ceramidase.
 
   
 0.816
scyTo_0019106
Uncharacterized protein.
     
 0.814
scyTo_0013612
Uncharacterized protein.
   
 
 0.788
scyTo_0020906
FA_desaturase domain-containing protein.
   
 
 0.788
scyTo_0018613
Lipid_DES domain-containing protein.
   
 
 0.788
scyTo_0013414
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
   
 
 0.778
scyTo_0011947
Glyco_hydro_59M domain-containing protein.
     
 0.773
scyTo_0011966
DAGKc domain-containing protein.
     
 0.761
scyTo_0001446
DAGKc domain-containing protein.
     
 0.761
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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