STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007107Uncharacterized protein. (207 aa)    
Predicted Functional Partners:
scyTo_0011724
Thioredoxin domain-containing protein; Belongs to the NDK family.
      
 0.520
scyTo_0018381
Uncharacterized protein.
      
 0.520
scyTo_0005676
PKD_channel domain-containing protein.
      
 0.505
scyTo_0011402
Tudor domain-containing protein.
      
 0.503
scyTo_0007238
J domain-containing protein.
      
 0.478
scyTo_0001683
Uncharacterized protein.
  
   
 0.423
scyTo_0002731
ICAT domain-containing protein.
    
   0.414
scyTo_0001751
Uncharacterized protein.
      
 0.410
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.