STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0012986Uncharacterized protein. (222 aa)    
Predicted Functional Partners:
scyTo_0025930
Uncharacterized protein.
   
  0.770
scyTo_0026486
Uncharacterized protein.
   
  0.770
scyTo_0012051
Guanylate kinase-like domain-containing protein.
    
 0.715
scyTo_0013192
Uncharacterized protein.
    
  0.693
scyTo_0015706
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.693
scyTo_0010134
VWFA domain-containing protein.
   
    0.662
scyTo_0017168
Uncharacterized protein.
   
    0.662
scyTo_0013343
NYD-SP28 domain-containing protein.
   
   0.643
scyTo_0025841
NYD-SP28_assoc domain-containing protein.
   
   0.643
scyTo_0011464
Uncharacterized protein.
    
  0.634
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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