STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007169Uncharacterized protein; Belongs to the intermediate filament family. (584 aa)    
Predicted Functional Partners:
scyTo_0010018
Uncharacterized protein.
   
 0.908
scyTo_0017180
CASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family.
    
 0.860
scyTo_0007446
Uncharacterized protein; Belongs to the intermediate filament family.
  
  
 
0.816
scyTo_0014516
LEM domain-containing protein.
    
 0.804
scyTo_0004667
SUN domain-containing protein.
    
 0.725
scyTo_0016345
SUN domain-containing protein.
    
 0.725
scyTo_0002010
Uncharacterized protein.
   
 0.705
scyTo_0006761
ULP_PROTEASE domain-containing protein.
    
 0.667
scyTo_0021875
MHC_II_alpha domain-containing protein.
    
   0.667
scyTo_0013318
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 0.650
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.