STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009484Fibrinogen C-terminal domain-containing protein. (540 aa)    
Predicted Functional Partners:
scyTo_0013755
Uncharacterized protein.
    
 
 0.966
scyTo_0005624
EMC1_C domain-containing protein.
    
 
 0.965
scyTo_0007174
TPR_REGION domain-containing protein.
   
 
 0.963
scyTo_0011114
MPN domain-containing protein.
    
 
 0.956
scyTo_0023473
Uncharacterized protein.
    
 
 0.952
scyTo_0015495
Uncharacterized protein.
   
 
 0.943
scyTo_0025928
Uncharacterized protein.
   
 
 0.943
scyTo_0006242
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
   
 
 0.939
scyTo_0023388
Uncharacterized protein.
   
 
 0.939
scyTo_0004474
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 
  0.696
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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