STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011445Uncharacterized protein. (456 aa)    
Predicted Functional Partners:
scyTo_0018540
PHD-type domain-containing protein.
 
     0.926
scyTo_0022729
Uncharacterized protein.
    
   0.774
scyTo_0026955
Uncharacterized protein.
    
   0.774
scyTo_0013619
Uncharacterized protein.
    
   0.731
scyTo_0005129
DUF3677 domain-containing protein.
    
   0.731
scyTo_0025203
Uncharacterized protein.
    
   0.731
scyTo_0016646
ENT domain-containing protein.
    
 
 0.554
scyTo_0007252
ADF-H domain-containing protein.
    
   0.483
scyTo_0000091
MICOS complex subunit MIC13; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
    
   0.483
scyTo_0011925
SH3 domain-containing protein.
    
   0.483
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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