STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011453Uncharacterized protein. (167 aa)    
Predicted Functional Partners:
scyTo_0007695
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.846
scyTo_0009646
Fe2OG dioxygenase domain-containing protein.
   
 0.820
scyTo_0002226
Fe2OG dioxygenase domain-containing protein.
   
 0.820
scyTo_0006125
Fam20C domain-containing protein.
      
 0.513
scyTo_0003937
SET domain-containing protein.
      
 0.511
scyTo_0022612
Uncharacterized protein.
      
 0.497
scyTo_0026480
Uncharacterized protein.
      
 0.497
scyTo_0012241
TLC domain-containing protein.
   
  
 0.476
scyTo_0011454
VWFA domain-containing protein.
      
 0.470
scyTo_0004778
UDG domain-containing protein.
      
 0.468
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.