STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007222Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (301 aa)    
Predicted Functional Partners:
APIP
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Functions in the methionine salvage pathway. May play a role in apoptosis.
 
 
 0.956
scyTo_0011080
Uncharacterized protein.
 
  
 0.944
scyTo_0015042
PNP_UDP_1 domain-containing protein.
  
 
 0.900
scyTo_0015909
PNP_UDP_1 domain-containing protein.
  
 
 0.900
scyTo_0003611
Tr-type G domain-containing protein.
  
 
 0.883
scyTo_0016484
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
 0.881
scyTo_0015988
PNP_UDP_1 domain-containing protein.
  
 
 0.881
scyTo_0014651
Uncharacterized protein.
  
 
 0.867
scyTo_0012287
Aldolase_II domain-containing protein.
  
 
 0.867
scyTo_0006012
Aldolase_II domain-containing protein.
  
 
 0.867
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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