STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007230alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (955 aa)    
Predicted Functional Partners:
scyTo_0005218
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
0.925
scyTo_0010450
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
0.924
scyTo_0002130
Fibronectin type-II domain-containing protein.
   
 
 0.706
scyTo_0014772
Uncharacterized protein.
   
 
 0.610
scyTo_0012063
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
    
 
 0.567
scyTo_0003956
Thioredoxin domain-containing protein.
    
 
 0.556
scyTo_0013307
Uncharacterized protein.
    
 
 0.549
scyTo_0017345
PRKCSH domain-containing protein.
    
 
 0.549
scyTo_0004644
Uncharacterized protein.
   
 
 0.535
scyTo_0020556
Glyco_hydro_63 domain-containing protein.
    
 
 0.524
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.