STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0004249Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
scyTo_0004081
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
     
 0.898
scyTo_0017342
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.898
scyTo_0019408
Uncharacterized protein.
    
 
 0.879
scyTo_0002705
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.870
scyTo_0009473
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
0.864
scyTo_0011736
IFT81_CH domain-containing protein.
    
 
 0.853
scyTo_0008559
Uncharacterized protein.
    
 0.835
scyTo_0018160
Uncharacterized protein.
    
 0.835
scyTo_0018972
ABC_transp_aux domain-containing protein.
    
 
 0.824
scyTo_0024039
Uncharacterized protein.
    
 
 0.824
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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