Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PES1 | scyTo_0002890 | A0A401NYN7 | A0A401PL34 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.999 |
PES1 | scyTo_0003992 | A0A401NYN7 | A0A401NIM8 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
PES1 | scyTo_0004250 | A0A401NYN7 | A0A401NNM1 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.906 |
PES1 | scyTo_0004836 | A0A401NYN7 | A0A401NXV3 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.997 |
PES1 | scyTo_0005273 | A0A401NYN7 | A0A401P516 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RRM domain-containing protein. | 0.999 |
PES1 | scyTo_0007898 | A0A401NYN7 | A0A401P0B9 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.997 |
PES1 | scyTo_0016119 | A0A401NYN7 | A0A401Q418 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | PUM-HD domain-containing protein. | 0.956 |
PES1 | scyTo_0018935 | A0A401NYN7 | A0A401PPF7 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nop domain-containing protein. | 0.985 |
PES1 | scyTo_0027193 | A0A401NYN7 | A0A401QMG0 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.998 |
scyTo_0002890 | PES1 | A0A401PL34 | A0A401NYN7 | Uncharacterized protein. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
scyTo_0002890 | scyTo_0003992 | A0A401PL34 | A0A401NIM8 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
scyTo_0002890 | scyTo_0004250 | A0A401PL34 | A0A401NNM1 | Uncharacterized protein. | SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.945 |
scyTo_0002890 | scyTo_0004836 | A0A401PL34 | A0A401NXV3 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.997 |
scyTo_0002890 | scyTo_0005273 | A0A401PL34 | A0A401P516 | Uncharacterized protein. | RRM domain-containing protein. | 0.999 |
scyTo_0002890 | scyTo_0007898 | A0A401PL34 | A0A401P0B9 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
scyTo_0002890 | scyTo_0016119 | A0A401PL34 | A0A401Q418 | Uncharacterized protein. | PUM-HD domain-containing protein. | 0.981 |
scyTo_0002890 | scyTo_0018935 | A0A401PL34 | A0A401PPF7 | Uncharacterized protein. | Nop domain-containing protein. | 0.978 |
scyTo_0002890 | scyTo_0027193 | A0A401PL34 | A0A401QMG0 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
scyTo_0003992 | PES1 | A0A401NIM8 | A0A401NYN7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
scyTo_0003992 | scyTo_0002890 | A0A401NIM8 | A0A401PL34 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.999 |
page 1 of 5