scyTo_0004301 protein (Scyliorhinus torazame)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

scyTo_0004301

Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (341 aa)

Predicted Functional Partners:

scyTo_0008201

0.598

scyTo_0014732

0.593

scyTo_0001606

0.586

scyTo_0022790

0.586

scyTo_0003459

0.468

scyTo_0008037

0.459

scyTo_0002351

0.437

scyTo_0015531

0.437

scyTo_0018393

0.437

Your Current Organism:

Scyliorhinus torazame

NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
scyTo_0001606	scyTo_0004301	A0A401PEJ0	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.586
scyTo_0001606	scyTo_0014732	A0A401PEJ0	A0A401NTE7	Uncharacterized protein.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.936
scyTo_0002351	scyTo_0004301	A0A401PJ03	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.437
scyTo_0003459	scyTo_0004301	A0A401PMM8	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.468
scyTo_0004301	scyTo_0001606	A0A401NPH3	A0A401PEJ0	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.586
scyTo_0004301	scyTo_0002351	A0A401NPH3	A0A401PJ03	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.437
scyTo_0004301	scyTo_0003459	A0A401NPH3	A0A401PMM8	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.468
scyTo_0004301	scyTo_0008037	A0A401NPH3	A0A401P2K3	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.459
scyTo_0004301	scyTo_0008201	A0A401NPH3	A0A401P549	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.598
scyTo_0004301	scyTo_0014732	A0A401NPH3	A0A401NTE7	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	0.593
scyTo_0004301	scyTo_0015531	A0A401NPH3	A0A401PU83	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.437
scyTo_0004301	scyTo_0018393	A0A401NPH3	A0A401PUY2	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.437
scyTo_0004301	scyTo_0022790	A0A401NPH3	A0A401Q7K4	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	Uncharacterized protein.	0.586
scyTo_0008037	scyTo_0004301	A0A401P2K3	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.459
scyTo_0008201	scyTo_0004301	A0A401P549	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.598
scyTo_0014732	scyTo_0001606	A0A401NTE7	A0A401PEJ0	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.936
scyTo_0014732	scyTo_0004301	A0A401NTE7	A0A401NPH3	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.593
scyTo_0014732	scyTo_0022790	A0A401NTE7	A0A401Q7K4	Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.	Uncharacterized protein.	0.892
scyTo_0015531	scyTo_0004301	A0A401PU83	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.437
scyTo_0018393	scyTo_0004301	A0A401PUY2	A0A401NPH3	Uncharacterized protein.	Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.	0.437

page 1 of 2

Server load: low (40%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About