STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009586Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
scyTo_0001796
Ubiquitin-like domain-containing protein.
   
  
 0.551
scyTo_0010279
Methyltransf_25 domain-containing protein.
      
 0.533
scyTo_0011340
Uncharacterized protein.
   
  
 0.505
scyTo_0014504
Uncharacterized protein.
   
  
 0.491
scyTo_0018580
Uncharacterized protein.
   
  
 0.491
scyTo_0011454
VWFA domain-containing protein.
      
 0.481
scyTo_0014216
Methyltransf_25 domain-containing protein.
      
 0.467
scyTo_0018477
Methyltransf_11 domain-containing protein.
      
 0.467
scyTo_0007008
Uncharacterized protein.
      
 0.463
scyTo_0009587
Uncharacterized protein.
      
 0.463
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.