STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009585Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
scyTo_0016254
Uncharacterized protein.
    
   0.530
scyTo_0004646
Uncharacterized protein.
    
 
 0.525
scyTo_0007122
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.516
scyTo_0007137
Ribosomal_L18e/L15P domain-containing protein.
      
 0.461
scyTo_0007487
Uncharacterized protein.
      
 0.461
scyTo_0001632
Uncharacterized protein.
      
 0.461
scyTo_0014995
EF-hand_13 domain-containing protein.
    
   0.447
scyTo_0015869
EF-hand_13 domain-containing protein.
    
   0.447
scyTo_0005708
mRNA_decap_C domain-containing protein.
    
   0.442
scyTo_0002017
Uncharacterized protein.
    
 
 0.421
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.