STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009600PDZ_5 domain-containing protein. (515 aa)    
Predicted Functional Partners:
scyTo_0006845
Uncharacterized protein.
 
     0.816
scyTo_0009318
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.714
scyTo_0027772
Serine/threonine-protein phosphatase.
    
 
 0.714
scyTo_0016406
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.692
scyTo_0010216
Uncharacterized protein.
    
 
 0.648
scyTo_0009435
Serine/threonine-protein phosphatase.
    
   0.403
scyTo_0014513
Serine/threonine-protein phosphatase with EF-hands.
    
   0.403
scyTo_0012539
Serine/threonine-protein phosphatase.
    
   0.403
scyTo_0002252
Serine/threonine-protein phosphatase.
    
   0.403
scyTo_0002253
Uncharacterized protein.
    
   0.403
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.