STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009644Uncharacterized protein. (567 aa)    
Predicted Functional Partners:
scyTo_0022725
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 0.855
scyTo_0014742
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 0.689
scyTo_0014743
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 0.689
scyTo_0021799
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 0.689
scyTo_0021366
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
     
 0.689
scyTo_0009247
PDZ domain-containing protein.
    
 0.675
scyTo_0012998
TNF receptor-associated factor.
    
 0.675
scyTo_0014711
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.675
scyTo_0010313
Uncharacterized protein.
    
 0.675
scyTo_0005245
Uncharacterized protein.
    
 0.675
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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