STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0009675AMP-binding domain-containing protein. (710 aa)    
Predicted Functional Partners:
scyTo_0013840
Uncharacterized protein; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.911
scyTo_0008230
Carrier domain-containing protein.
  
 0.902
scyTo_0019601
Uncharacterized protein.
    
 0.840
scyTo_0008050
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.839
scyTo_0019727
Acyl-CoA_ox_N domain-containing protein.
  
 0.839
scyTo_0018750
ACOX domain-containing protein.
  
 0.839
scyTo_0009209
SCP2 domain-containing protein.
  
 0.836
scyTo_0009208
Uncharacterized protein.
  
 0.836
scyTo_0020029
Uncharacterized protein.
  
 0.836
scyTo_0011652
Uncharacterized protein.
    
 0.830
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.