STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0004427Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
scyTo_0020160
HAGH_C domain-containing protein.
    
 
 0.618
scyTo_0022626
Uncharacterized protein.
      
 0.531
scyTo_0009066
Uncharacterized protein.
      
 0.497
scyTo_0017452
Uncharacterized protein.
      
 0.480
scyTo_0005702
Lactamase_B domain-containing protein.
    
 
 0.458
scyTo_0015669
Lactamase_B domain-containing protein.
    
 
 0.458
scyTo_0006534
UBX domain-containing protein.
    
   0.457
scyTo_0018805
BTB_2 domain-containing protein.
    
   0.420
scyTo_0016317
BTB domain-containing protein.
    
   0.420
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
Server load: medium (62%) [HD]