STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007426Exonuclease domain-containing protein. (703 aa)    
Predicted Functional Partners:
scyTo_0008319
SLBP_RNA_bind domain-containing protein.
   
 
 0.818
scyTo_0001749
SLBP_RNA_bind domain-containing protein.
   
 
 0.818
scyTo_0009820
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.727
scyTo_0014076
Uncharacterized protein.
   
 0.714
scyTo_0006927
Ribosomal_L7Ae domain-containing protein.
     
 0.676
scyTo_0021569
RNase_PH domain-containing protein.
   
 0.671
scyTo_0026633
RNase_PH domain-containing protein.
   
 0.671
scyTo_0002706
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
  0.664
scyTo_0008940
Ribos_L4_asso_C domain-containing protein.
    
 0.663
scyTo_0002783
Uncharacterized protein.
   
 
 0.657
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.