scyTo_0007437 protein (Scyliorhinus torazame)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

scyTo_0007437

Uncharacterized protein. (192 aa)

Predicted Functional Partners:

scyTo_0001866

0.998

scyTo_0004507

0.972

scyTo_0004506

0.972

scyTo_0010679

0.955

scyTo_0006244

0.944

scyTo_0001646

0.937

scyTo_0001792

0.933

scyTo_0011526

0.932

scyTo_0003839

0.917

scyTo_0018917

0.917

Your Current Organism:

Scyliorhinus torazame

NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
scyTo_0001646	scyTo_0001792	A0A401PEW2	A0A401PFX1	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.700
scyTo_0001646	scyTo_0001866	A0A401PEW2	A0A401PGD1	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.980
scyTo_0001646	scyTo_0004506	A0A401PEW2	A0A401NSU8	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.709
scyTo_0001646	scyTo_0004507	A0A401PEW2	A0A401NSP5	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.709
scyTo_0001646	scyTo_0007437	A0A401PEW2	A0A401NSF5	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.937
scyTo_0001646	scyTo_0010679	A0A401PEW2	A0A401PA18	Non-specific serine/threonine protein kinase.	Uncharacterized protein.	0.551
scyTo_0001792	scyTo_0001646	A0A401PFX1	A0A401PEW2	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.700
scyTo_0001792	scyTo_0001866	A0A401PFX1	A0A401PGD1	Uncharacterized protein.	Uncharacterized protein.	0.997
scyTo_0001792	scyTo_0004506	A0A401PFX1	A0A401NSU8	Uncharacterized protein.	Uncharacterized protein.	0.995
scyTo_0001792	scyTo_0004507	A0A401PFX1	A0A401NSP5	Uncharacterized protein.	Uncharacterized protein.	0.995
scyTo_0001792	scyTo_0006244	A0A401PFX1	A0A401PGU6	Uncharacterized protein.	Uncharacterized protein.	0.812
scyTo_0001792	scyTo_0007437	A0A401PFX1	A0A401NSF5	Uncharacterized protein.	Uncharacterized protein.	0.933
scyTo_0001792	scyTo_0010679	A0A401PFX1	A0A401PA18	Uncharacterized protein.	Uncharacterized protein.	0.930
scyTo_0001866	scyTo_0001646	A0A401PGD1	A0A401PEW2	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.980
scyTo_0001866	scyTo_0001792	A0A401PGD1	A0A401PFX1	Uncharacterized protein.	Uncharacterized protein.	0.997
scyTo_0001866	scyTo_0004506	A0A401PGD1	A0A401NSU8	Uncharacterized protein.	Uncharacterized protein.	0.983
scyTo_0001866	scyTo_0004507	A0A401PGD1	A0A401NSP5	Uncharacterized protein.	Uncharacterized protein.	0.983
scyTo_0001866	scyTo_0007437	A0A401PGD1	A0A401NSF5	Uncharacterized protein.	Uncharacterized protein.	0.998
scyTo_0001866	scyTo_0010679	A0A401PGD1	A0A401PA18	Uncharacterized protein.	Uncharacterized protein.	0.460
scyTo_0003839	scyTo_0007437	A0A401PNR4	A0A401NSF5	DHR-2 domain-containing protein; Belongs to the DOCK family.	Uncharacterized protein.	0.917