STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0000203Uncharacterized protein. (891 aa)    
Predicted Functional Partners:
scyTo_0001642
Vang-like protein.
    
 0.984
scyTo_0012637
Uncharacterized protein.
    
 0.964
scyTo_0006304
DIX domain-containing protein.
    
 0.964
scyTo_0006303
Uncharacterized protein.
    
 0.911
scyTo_0022675
DEP domain-containing protein.
    
 0.911
scyTo_0001278
PCI domain-containing protein.
    
  0.723
scyTo_0008273
PCI domain-containing protein.
     
 0.697
scyTo_0023319
PET domain-containing protein.
 
   
 
0.685
scyTo_0012197
Uncharacterized protein.
    
 0.679
scyTo_0018399
ANK_REP_REGION domain-containing protein.
    
 0.679
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.