Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
scyTo_0000821 | scyTo_0003260 | A0A401P4S5 | A0A401PM35 | Uncharacterized protein. | Uncharacterized protein. | 0.928 |
scyTo_0000821 | scyTo_0004514 | A0A401P4S5 | A0A401NSX1 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
scyTo_0000821 | scyTo_0004593 | A0A401P4S5 | A0A401NU54 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.905 |
scyTo_0000821 | scyTo_0011068 | A0A401P4S5 | A0A401NGQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.994 |
scyTo_0000821 | scyTo_0012681 | A0A401P4S5 | A0A401NGR1 | Uncharacterized protein. | SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. | 0.870 |
scyTo_0000821 | scyTo_0014707 | A0A401P4S5 | A0A401NSV4 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
scyTo_0000821 | scyTo_0014714 | A0A401P4S5 | A0A401NT46 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.905 |
scyTo_0000821 | scyTo_0014732 | A0A401P4S5 | A0A401NTE7 | Uncharacterized protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.940 |
scyTo_0000821 | scyTo_0015636 | A0A401P4S5 | A0A401PVW8 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
scyTo_0000821 | scyTo_0016577 | A0A401P4S5 | A0A401PTV7 | Uncharacterized protein. | Cytochrome c oxidase subunit 6A, mitochondrial. | 0.883 |
scyTo_0003260 | scyTo_0000821 | A0A401PM35 | A0A401P4S5 | Uncharacterized protein. | Uncharacterized protein. | 0.928 |
scyTo_0003260 | scyTo_0004593 | A0A401PM35 | A0A401NU54 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.982 |
scyTo_0003260 | scyTo_0011068 | A0A401PM35 | A0A401NGQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.916 |
scyTo_0003260 | scyTo_0012681 | A0A401PM35 | A0A401NGR1 | Uncharacterized protein. | SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. | 0.774 |
scyTo_0003260 | scyTo_0014707 | A0A401PM35 | A0A401NSV4 | Uncharacterized protein. | Uncharacterized protein. | 0.915 |
scyTo_0003260 | scyTo_0014714 | A0A401PM35 | A0A401NT46 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.982 |
scyTo_0003260 | scyTo_0016577 | A0A401PM35 | A0A401PTV7 | Uncharacterized protein. | Cytochrome c oxidase subunit 6A, mitochondrial. | 0.999 |
scyTo_0004514 | scyTo_0000821 | A0A401NSX1 | A0A401P4S5 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
scyTo_0004514 | scyTo_0004593 | A0A401NSX1 | A0A401NU54 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.820 |
scyTo_0004514 | scyTo_0011068 | A0A401NSX1 | A0A401NGQ6 | Uncharacterized protein. | Uncharacterized protein. | 0.876 |
page 1 of 5