STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0011691Uncharacterized protein. (1720 aa)    
Predicted Functional Partners:
scyTo_0023708
VPS13_C domain-containing protein.
 
     0.916
scyTo_0017845
SHR-BD domain-containing protein.
 
     0.904
scyTo_0004865
ATG_C domain-containing protein.
 
      0.893
scyTo_0017055
VPS13_C domain-containing protein.
 
      0.883
scyTo_0021353
Uncharacterized protein.
 
     0.648
scyTo_0001496
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.557
scyTo_0003681
AAA domain-containing protein.
    
   0.461
scyTo_0014554
CCHC-type domain-containing protein.
    
 
 0.441
scyTo_0014745
CSD_1 domain-containing protein.
    
 
 0.441
scyTo_0005741
CSD_1 domain-containing protein.
    
 
 0.441
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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