STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0004521Uncharacterized protein. (1354 aa)    
Predicted Functional Partners:
scyTo_0006654
Uncharacterized protein.
    
 0.995
scyTo_0015963
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
   
 0.995
scyTo_0004624
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.992
scyTo_0009836
DNA helicase; Belongs to the MCM family.
   
 0.986
scyTo_0019543
DNA helicase; Belongs to the MCM family.
   
 0.964
scyTo_0008772
Sld5 domain-containing protein.
   
 
 0.963
scyTo_0008315
DNA helicase; Belongs to the MCM family.
   
 0.962
scyTo_0011750
Uncharacterized protein.
   
 0.959
scyTo_0022301
Uncharacterized protein.
   
 0.959
scyTo_0021604
Uncharacterized protein.
   
 0.959
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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