STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0004609acidPPc domain-containing protein. (290 aa)    
Predicted Functional Partners:
scyTo_0011677
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.923
scyTo_0001010
Uncharacterized protein.
    
 0.923
scyTo_0006729
LNS2 domain-containing protein.
    
 0.923
scyTo_0003838
LNS2 domain-containing protein.
    
 0.923
scyTo_0000039
acidPPc domain-containing protein.
  
 
 
0.917
scyTo_0004319
Uncharacterized protein; Belongs to the acid ceramidase family.
    
 0.910
scyTo_0013248
Uncharacterized protein.
    
 0.906
scyTo_0017150
LNS2 domain-containing protein.
    
 0.906
scyTo_0024048
Lipin_mid domain-containing protein.
    
 0.906
scyTo_0010250
acidPPc domain-containing protein.
     
 0.905
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.