STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_00046134Fe-4S ferredoxin-type domain-containing protein. (478 aa)    
Predicted Functional Partners:
scyTo_0017835
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
  
 0.975
scyTo_0010760
OMPdecase domain-containing protein.
  
 0.973
scyTo_0008686
Uncharacterized protein.
  
 
 0.970
scyTo_0014877
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 0.963
scyTo_0007977
NAD_binding_1 domain-containing protein.
  
 0.963
scyTo_0003436
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
  
 0.963
scyTo_0003778
FAD-binding FR-type domain-containing protein.
  
 0.963
scyTo_0020610
FAD-binding FR-type domain-containing protein.
  
 0.963
scyTo_0006920
Amidohydro-rel domain-containing protein.
  
 0.941
scyTo_0007152
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
 
     0.931
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.