STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007605UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)    
Predicted Functional Partners:
scyTo_0003710
Uncharacterized protein.
   
 0.999
scyTo_0006682
Uncharacterized protein.
   
 0.998
scyTo_0007937
Small ubiquitin-related modifier.
   
 0.991
scyTo_0015577
Small ubiquitin-related modifier.
   
 0.991
scyTo_0008509
Small ubiquitin-related modifier.
   
 0.990
scyTo_0027139
Small ubiquitin-related modifier.
   
 0.990
scyTo_0024919
Uncharacterized protein.
    
 0.985
scyTo_0009094
UBA2_C domain-containing protein.
   
 0.977
scyTo_0009093
ThiF domain-containing protein.
   
 0.977
scyTo_0014301
Uncharacterized protein.
   
 0.977
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.