STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0004692Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
scyTo_0021380
Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.
   
    0.900
scyTo_0020604
Uncharacterized protein.
   
    0.872
scyTo_0000444
Uncharacterized protein.
   
  
 0.850
scyTo_0007662
Uncharacterized protein.
   
    0.847
scyTo_0005273
RRM domain-containing protein.
   
    0.846
scyTo_0020387
Uncharacterized protein.
   
    0.840
scyTo_0007873
WD_REPEATS_REGION domain-containing protein.
   
   0.816
scyTo_0012482
NUC153 domain-containing protein.
   
  
 0.804
scyTo_0017448
Brix domain-containing protein.
   
   0.801
scyTo_0005374
Uncharacterized protein.
   
  
 0.797
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.