Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PES1 | WDR12 | A0A401NYN7 | A0A401P858 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
PES1 | scyTo_0003992 | A0A401NYN7 | A0A401NIM8 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
PES1 | scyTo_0005258 | A0A401NYN7 | A0A401P4Y6 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.999 |
PES1 | scyTo_0007646 | A0A401NYN7 | A0A401NW58 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.938 |
PES1 | scyTo_0018935 | A0A401NYN7 | A0A401PPF7 | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nop domain-containing protein. | 0.985 |
WDR12 | PES1 | A0A401P858 | A0A401NYN7 | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
WDR12 | scyTo_0003992 | A0A401P858 | A0A401NIM8 | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
WDR12 | scyTo_0005258 | A0A401P858 | A0A401P4Y6 | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | CP-type G domain-containing protein. | 0.999 |
WDR12 | scyTo_0007646 | A0A401P858 | A0A401NW58 | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Uncharacterized protein. | 0.880 |
WDR12 | scyTo_0018935 | A0A401P858 | A0A401PPF7 | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nop domain-containing protein. | 0.985 |
scyTo_0001472 | scyTo_0007646 | A0A401PDE6 | A0A401NW58 | Uncharacterized protein. | Uncharacterized protein. | 0.831 |
scyTo_0001472 | scyTo_0010338 | A0A401PDE6 | A0A401P4J0 | Uncharacterized protein. | TOG domain-containing protein. | 0.994 |
scyTo_0001472 | scyTo_0013472 | A0A401PDE6 | A0A401NXC7 | Uncharacterized protein. | CPSF_A domain-containing protein. | 0.995 |
scyTo_0002783 | scyTo_0003992 | A0A401PKP9 | A0A401NIM8 | Uncharacterized protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.495 |
scyTo_0002783 | scyTo_0005258 | A0A401PKP9 | A0A401P4Y6 | Uncharacterized protein. | CP-type G domain-containing protein. | 0.584 |
scyTo_0002783 | scyTo_0007646 | A0A401PKP9 | A0A401NW58 | Uncharacterized protein. | Uncharacterized protein. | 0.868 |
scyTo_0002783 | scyTo_0015545 | A0A401PKP9 | A0A401PUJ4 | Uncharacterized protein. | Uncharacterized protein; Belongs to the argonaute family. | 0.554 |
scyTo_0003992 | PES1 | A0A401NIM8 | A0A401NYN7 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
scyTo_0003992 | WDR12 | A0A401NIM8 | A0A401P858 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
scyTo_0003992 | scyTo_0002783 | A0A401NIM8 | A0A401PKP9 | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | Uncharacterized protein. | 0.495 |
page 1 of 3