STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007662Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
scyTo_0002090
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
scyTo_0009543
WD_REPEATS_REGION domain-containing protein.
   
 
 0.997
scyTo_0011616
Uncharacterized protein.
   
 0.997
scyTo_0001215
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.981
scyTo_0005374
Uncharacterized protein.
   
 0.980
scyTo_0006994
S4 RNA-binding domain-containing protein.
  
 0.960
scyTo_0018804
Uncharacterized protein.
   
 
 0.958
scyTo_0005726
Sas10 domain-containing protein.
   
 
 0.953
scyTo_0024588
Uncharacterized protein.
   
 
 0.948
scyTo_0000383
WD_REPEATS_REGION domain-containing protein.
   
 0.946
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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