STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0013425NFACT-R_1 domain-containing protein. (880 aa)    
Predicted Functional Partners:
scyTo_0010310
RING-type domain-containing protein.
    
 
 0.932
scyTo_0016069
Uncharacterized protein.
    
 
 0.932
scyTo_0024413
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
   0.889
scyTo_0010193
KOW domain-containing protein.
   
   0.883
scyTo_0014904
Uncharacterized protein.
   
   0.875
scyTo_0004832
Uncharacterized protein.
    
 
 0.809
scyTo_0007691
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.799
scyTo_0005229
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.799
scyTo_0000523
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.798
scyTo_0017797
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.798
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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