STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0010009UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (234 aa)    
Predicted Functional Partners:
scyTo_0002904
Uncharacterized protein.
   
 0.981
scyTo_0015053
AN1-type domain-containing protein.
   
 0.906
scyTo_0007086
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.902
scyTo_0002566
ERCC4 domain-containing protein.
    
 0.899
scyTo_0003819
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.899
scyTo_0015634
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.899
scyTo_0018644
Helicase C-terminal domain-containing protein.
    
 0.899
scyTo_0018666
Helicase ATP-binding domain-containing protein.
    
 0.899
scyTo_0013684
Uncharacterized protein.
   
 0.897
scyTo_0015301
RBR-type E3 ubiquitin transferase.
    
 0.896
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.