STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0007836KCNQ_channel domain-containing protein. (459 aa)    
Predicted Functional Partners:
scyTo_0002200
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.977
scyTo_0009262
Ion_trans domain-containing protein; Belongs to the potassium channel family.
 
 
 0.921
scyTo_0004478
Ion_trans domain-containing protein; Belongs to the potassium channel family.
 
 
 0.921
scyTo_0010193
KOW domain-containing protein.
  
 0.911
scyTo_0006927
Ribosomal_L7Ae domain-containing protein.
   
 0.906
scyTo_0014904
Uncharacterized protein.
  
 0.904
scyTo_0016225
TRASH domain-containing protein.
  
 0.902
scyTo_0018765
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.896
scyTo_0014535
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.895
scyTo_0007835
Ion_trans domain-containing protein; Belongs to the potassium channel family.
 
      0.895
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.