STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0013597Uncharacterized protein. (2008 aa)    
Predicted Functional Partners:
scyTo_0002817
Uncharacterized protein.
   
0.864
scyTo_0002200
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.841
scyTo_0004468
Uncharacterized protein.
  
0.788
scyTo_0020031
Uncharacterized protein.
  
0.786
scyTo_0020337
Uncharacterized protein.
  
0.783
scyTo_0017283
Ion_trans_2 domain-containing protein.
   
0.775
scyTo_0001691
Uncharacterized protein.
    
  0.723
scyTo_0026415
MAM domain-containing protein.
    
  0.723
scyTo_0009296
Integrin beta; Belongs to the integrin beta chain family.
    
 0.702
scyTo_0014421
Integrin beta.
    
 0.702
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.