Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
scyTo_0003377 | scyTo_0005111 | A0A401PMF6 | A0A401P2E7 | BAH domain-containing protein. | Uncharacterized protein. | 0.754 |
scyTo_0003377 | scyTo_0009616 | A0A401PMF6 | A0A401NQA9 | BAH domain-containing protein. | SANT domain-containing protein. | 0.900 |
scyTo_0003377 | scyTo_0012599 | A0A401PMF6 | A0A401NFT0 | BAH domain-containing protein. | Uncharacterized protein. | 0.845 |
scyTo_0003377 | scyTo_0022798 | A0A401PMF6 | A0A401Q7V8 | BAH domain-containing protein. | Uncharacterized protein. | 0.899 |
scyTo_0003879 | scyTo_0005111 | A0A401PNT0 | A0A401P2E7 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.785 |
scyTo_0003879 | scyTo_0011690 | A0A401PNT0 | A0A401NSV6 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.597 |
scyTo_0003879 | scyTo_0021427 | A0A401PNT0 | A0A401Q882 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.597 |
scyTo_0003879 | scyTo_0021642 | A0A401PNT0 | A0A401QAZ5 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.597 |
scyTo_0004776 | scyTo_0005111 | A0A401NWZ9 | A0A401P2E7 | HATPase_c domain-containing protein. | Uncharacterized protein. | 0.726 |
scyTo_0005111 | scyTo_0003377 | A0A401P2E7 | A0A401PMF6 | Uncharacterized protein. | BAH domain-containing protein. | 0.754 |
scyTo_0005111 | scyTo_0003879 | A0A401P2E7 | A0A401PNT0 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.785 |
scyTo_0005111 | scyTo_0004776 | A0A401P2E7 | A0A401NWZ9 | Uncharacterized protein. | HATPase_c domain-containing protein. | 0.726 |
scyTo_0005111 | scyTo_0009616 | A0A401P2E7 | A0A401NQA9 | Uncharacterized protein. | SANT domain-containing protein. | 0.754 |
scyTo_0005111 | scyTo_0011690 | A0A401P2E7 | A0A401NSV6 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
scyTo_0005111 | scyTo_0012599 | A0A401P2E7 | A0A401NFT0 | Uncharacterized protein. | Uncharacterized protein. | 0.754 |
scyTo_0005111 | scyTo_0014953 | A0A401P2E7 | A0A401NYZ0 | Uncharacterized protein. | Uncharacterized protein. | 0.705 |
scyTo_0005111 | scyTo_0021427 | A0A401P2E7 | A0A401Q882 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
scyTo_0005111 | scyTo_0021642 | A0A401P2E7 | A0A401QAZ5 | Uncharacterized protein. | Uncharacterized protein. | 0.698 |
scyTo_0005111 | scyTo_0022798 | A0A401P2E7 | A0A401Q7V8 | Uncharacterized protein. | Uncharacterized protein. | 0.754 |
scyTo_0009616 | scyTo_0003377 | A0A401NQA9 | A0A401PMF6 | SANT domain-containing protein. | BAH domain-containing protein. | 0.900 |
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