STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0005205Peptidase M12B domain-containing protein. (736 aa)    
Predicted Functional Partners:
scyTo_0012623
Pep_M12B_propep domain-containing protein.
 
     0.814
scyTo_0014970
GON domain-containing protein.
 
     
0.701
scyTo_0009129
Pep_M12B_propep domain-containing protein.
 
     0.574
scyTo_0018201
Glucosylceramidase.
   
 
  0.522
scyTo_0015807
PKD domain-containing protein.
   
 
  0.522
scyTo_0016677
Uncharacterized protein.
    
 0.480
scyTo_0015700
Uncharacterized protein.
    
 0.480
scyTo_0008023
Uncharacterized protein.
     
 0.469
scyTo_0011203
Uncharacterized protein.
 
   
  0.442
scyTo_0022214
Uncharacterized protein.
   
  0.403
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.