STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0010327SP-RING-type domain-containing protein. (968 aa)    
Predicted Functional Partners:
scyTo_0007605
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.888
scyTo_0010294
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.888
scyTo_0017317
BTB domain-containing protein.
    
 0.888
scyTo_0008509
Small ubiquitin-related modifier.
    
 0.886
scyTo_0027139
Small ubiquitin-related modifier.
    
 0.886
scyTo_0007937
Small ubiquitin-related modifier.
    
 0.880
scyTo_0015577
Small ubiquitin-related modifier.
    
 0.880
scyTo_0015160
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.817
scyTo_0007086
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.813
scyTo_0008136
Uncharacterized protein.
    
 0.778
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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