STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0005296EF-hand domain-containing protein. (499 aa)    
Predicted Functional Partners:
scyTo_0013242
Uncharacterized protein.
    
 0.889
scyTo_0007732
Uncharacterized protein.
   
 0.877
scyTo_0017432
Uncharacterized protein.
   
 0.877
scyTo_0023421
Uncharacterized protein.
   
 0.877
scyTo_0002603
Uncharacterized protein.
    
 0.851
scyTo_0024070
Uncharacterized protein.
    
 0.851
scyTo_0015758
Uncharacterized protein.
   
 0.849
scyTo_0005149
PIPK domain-containing protein.
   
 
 0.844
scyTo_0009059
PIPK domain-containing protein.
     
 0.843
scyTo_0000550
Calponin-homology (CH) domain-containing protein.
    
 0.835
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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