STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0010514UBA domain-containing protein. (638 aa)    
Predicted Functional Partners:
scyTo_0012684
Uncharacterized protein.
     
 0.798
scyTo_0017769
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.729
scyTo_0005768
Aminotran_1_2 domain-containing protein.
    
 0.673
scyTo_0006399
Aminotran_1_2 domain-containing protein.
    
 0.673
scyTo_0008736
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
     
 0.658
scyTo_0024551
Uncharacterized protein.
     
 0.658
scyTo_0013296
Methyltransf_11 domain-containing protein.
  
 0.649
scyTo_0003888
FGE-sulfatase domain-containing protein.
  
 0.649
scyTo_0020257
FGE-sulfatase domain-containing protein.
  
 0.649
scyTo_0020466
Uncharacterized protein.
  
 0.649
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.