STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0005470Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (239 aa)    
Predicted Functional Partners:
scyTo_0012694
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 0.999
scyTo_0006927
Ribosomal_L7Ae domain-containing protein.
  
 0.999
scyTo_0004009
Tr-type G domain-containing protein.
  
 0.999
scyTo_0011211
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
scyTo_0006994
S4 RNA-binding domain-containing protein.
  
 0.999
scyTo_0009496
S10_plectin domain-containing protein.
   
 0.999
scyTo_0014535
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.999
scyTo_0004496
Uncharacterized protein.
  
 0.999
scyTo_0011716
Ribosomal protein L37; Binds to the 23S rRNA.
  
 0.999
scyTo_0014823
Uncharacterized protein.
  
 0.999
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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