STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0001049Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (376 aa)    
Predicted Functional Partners:
scyTo_0010691
Uncharacterized protein.
   
 
 0.722
scyTo_0012391
SKA2 domain-containing protein.
   
 
 0.716
scyTo_0000582
Uncharacterized protein.
     
 0.696
scyTo_0004521
Uncharacterized protein.
   
 
 0.688
scyTo_0006401
Uncharacterized protein.
    
 
 0.662
scyTo_0010694
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
    
 
 0.656
scyTo_0006654
Uncharacterized protein.
   
   0.649
scyTo_0003630
RING-type domain-containing protein.
    
   0.644
scyTo_0015963
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
   
 
 0.614
scyTo_0008517
Uncharacterized protein.
    
 
 0.521
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.