STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0001070RING-type domain-containing protein. (291 aa)    
Predicted Functional Partners:
scyTo_0018507
Uncharacterized protein.
   
    0.822
scyTo_0006088
UBX domain-containing protein 7.
    
  0.785
scyTo_0018086
USP domain-containing protein.
     
 0.749
scyTo_0023514
USP domain-containing protein.
     
 0.749
scyTo_0014834
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.743
scyTo_0018298
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.743
scyTo_0021592
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.743
scyTo_0023389
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.743
scyTo_0024340
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.743
scyTo_0012119
Uncharacterized protein.
     
 0.715
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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