STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0012550DUF3456 domain-containing protein. (156 aa)    
Predicted Functional Partners:
scyTo_0004776
HATPase_c domain-containing protein.
    
 0.789
scyTo_0001169
Uncharacterized protein.
    
 0.738
scyTo_0021655
Uncharacterized protein.
   
 
 0.711
scyTo_0006854
TIR domain-containing protein; Belongs to the Toll-like receptor family.
    
 0.700
scyTo_0021415
TIR domain-containing protein.
    
 0.610
scyTo_0009531
TIR domain-containing protein.
    
 0.581
scyTo_0004795
TIR domain-containing protein; Belongs to the Toll-like receptor family.
    
 0.581
scyTo_0003195
TIR domain-containing protein.
    
 0.581
scyTo_0022785
TIR domain-containing protein.
    
 0.581
scyTo_0004493
TIR domain-containing protein; Belongs to the Toll-like receptor family.
    
 0.574
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.