scyTo_0001244 protein (Scyliorhinus torazame)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

scyTo_0001244

Uncharacterized protein. (127 aa)

Predicted Functional Partners:

scyTo_0009724

0.700

scyTo_0006502

0.700

scyTo_0006501

0.700

scyTo_0000196

0.640

scyTo_0004113

0.521

scyTo_0004497

0.518

scyTo_0004208

0.507

scyTo_0002793

0.491

scyTo_0024347

0.489

scyTo_0004270

0.481

Your Current Organism:

Scyliorhinus torazame

NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
scyTo_0000196	scyTo_0001244	A0A401NSD2	A0A401PB08	TM2 domain-containing protein.	Uncharacterized protein.	0.640
scyTo_0001244	scyTo_0000196	A0A401PB08	A0A401NSD2	Uncharacterized protein.	TM2 domain-containing protein.	0.640
scyTo_0001244	scyTo_0002793	A0A401PB08	A0A401PKQ8	Uncharacterized protein.	Uncharacterized protein.	0.491
scyTo_0001244	scyTo_0004113	A0A401PB08	A0A401NL01	Uncharacterized protein.	Uncharacterized protein.	0.521
scyTo_0001244	scyTo_0004208	A0A401PB08	A0A401NMP6	Uncharacterized protein.	Uncharacterized protein.	0.507
scyTo_0001244	scyTo_0004270	A0A401PB08	A0A401NNY4	Uncharacterized protein.	Uncharacterized protein.	0.481
scyTo_0001244	scyTo_0004497	A0A401PB08	A0A401NSM2	Uncharacterized protein.	Uncharacterized protein.	0.518
scyTo_0001244	scyTo_0006501	A0A401PB08	A0A401PIE1	Uncharacterized protein.	FAM83 domain-containing protein.	0.700
scyTo_0001244	scyTo_0006502	A0A401PB08	A0A401PI95	Uncharacterized protein.	Uncharacterized protein.	0.700
scyTo_0001244	scyTo_0009724	A0A401PB08	A0A401NSH7	Uncharacterized protein.	FAM83 domain-containing protein.	0.700
scyTo_0001244	scyTo_0024347	A0A401PB08	A0A401QDR3	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.	0.489
scyTo_0002793	scyTo_0001244	A0A401PKQ8	A0A401PB08	Uncharacterized protein.	Uncharacterized protein.	0.491
scyTo_0004113	scyTo_0001244	A0A401NL01	A0A401PB08	Uncharacterized protein.	Uncharacterized protein.	0.521
scyTo_0004113	scyTo_0004497	A0A401NL01	A0A401NSM2	Uncharacterized protein.	Uncharacterized protein.	0.914
scyTo_0004208	scyTo_0001244	A0A401NMP6	A0A401PB08	Uncharacterized protein.	Uncharacterized protein.	0.507
scyTo_0004208	scyTo_0004497	A0A401NMP6	A0A401NSM2	Uncharacterized protein.	Uncharacterized protein.	0.433
scyTo_0004208	scyTo_0024347	A0A401NMP6	A0A401QDR3	Uncharacterized protein.	zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.	0.446
scyTo_0004270	scyTo_0001244	A0A401NNY4	A0A401PB08	Uncharacterized protein.	Uncharacterized protein.	0.481
scyTo_0004497	scyTo_0001244	A0A401NSM2	A0A401PB08	Uncharacterized protein.	Uncharacterized protein.	0.518
scyTo_0004497	scyTo_0004113	A0A401NSM2	A0A401NL01	Uncharacterized protein.	Uncharacterized protein.	0.914