STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0008605Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
scyTo_0002622
Uncharacterized protein.
    
 
 0.963
scyTo_0010787
Uncharacterized protein.
   
 
 0.891
scyTo_0022902
Uncharacterized protein.
   
 
 0.891
scyTo_0009108
Uncharacterized protein.
  
 
 0.889
scyTo_0018293
Uncharacterized protein.
    
 
 0.883
scyTo_0011331
Uncharacterized protein.
   
 
 0.867
scyTo_0017077
CTLH domain-containing protein.
   
 
 0.867
scyTo_0022935
Protein yippee-like; Belongs to the yippee family.
    
 
 0.853
scyTo_0003739
LisH domain-containing protein.
    
 
 0.838
scyTo_0006794
MYND-type domain-containing protein.
    
 
 0.825
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.