STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0005751Uncharacterized protein. (734 aa)    
Predicted Functional Partners:
scyTo_0004855
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 0.985
scyTo_0014579
WD_REPEATS_REGION domain-containing protein.
    
 
 0.962
scyTo_0022190
WD_REPEATS_REGION domain-containing protein.
    
 
 0.962
scyTo_0005648
Uncharacterized protein.
    
 
 0.954
scyTo_0011686
Uncharacterized protein.
    
 
 0.951
scyTo_0005771
Uncharacterized protein.
    
 
 0.942
scyTo_0005784
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.926
scyTo_0005487
CPSF_A domain-containing protein.
    
 
 0.922
scyTo_0018685
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.889
scyTo_0010303
WD_REPEATS_REGION domain-containing protein.
    
 
 0.879
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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