STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0005967Uncharacterized protein. (48 aa)    
Predicted Functional Partners:
scyTo_0017532
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
    
 0.858
scyTo_0022851
NAPRTase_C domain-containing protein.
    
 0.834
scyTo_0011168
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
  
 
 0.817
scyTo_0014806
Flavokinase domain-containing protein.
  
 
 0.804
scyTo_0009107
Deacetylase sirtuin-type domain-containing protein.
    
 0.803
scyTo_0011463
NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily.
    
 0.803
scyTo_0007493
Deacetylase sirtuin-type domain-containing protein.
    
 0.803
scyTo_0013360
Deacetylase sirtuin-type domain-containing protein.
    
 0.803
scyTo_0027351
Uncharacterized protein.
    
 0.803
scyTo_0004996
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
    
 0.792
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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