STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scyTo_0001869Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (260 aa)    
Predicted Functional Partners:
scyTo_0017448
Brix domain-containing protein.
   
 
 0.851
scyTo_0003001
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
  
 
0.818
scyTo_0017784
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.756
scyTo_0015008
Ribosomal_L18_c domain-containing protein.
    
 
 0.687
scyTo_0024040
Ribosomal_L18_c domain-containing protein.
    
 
 0.687
scyTo_0025085
Ribosomal_L18_c domain-containing protein.
    
 
 0.687
scyTo_0003992
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.678
scyTo_0007691
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.675
scyTo_0005229
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.675
scyTo_0020977
Alpha-carbonic anhydrase domain-containing protein.
  
  
0.675
Your Current Organism:
Scyliorhinus torazame
NCBI taxonomy Id: 75743
Other names: S. torazame, cloudy catshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.